SceneQC-Pre-Trimming Quality viewer

SceneQC

Pre trimming Quality Viewer

File

C3-C7_16SrRNA_R1.fastq

Size

8.51 MB

Reads

15595

Conserved base

90% (10 percentil)
Stats
Best window-list score 30 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35 35
Worst window-list score 20 15 15 15 20 15 15 15 20 15 15 15 20 15 15 15 15 15 15 15 15 15 15 15 15

Scenario Amplicon

Stats
Minimum required Q-score 25
Minimum read lenght 200 bp
Conserved reads 7429 reads
% Conserved reads 47.6 %

Scenario Genomics y metagenomics

Stats
Minimum required Q-score 20
Minimum read lenght 100 bp
Conserved reads 8008
% Conserved reads 51.4%

Scenario Diversity

Stats
Minimum required Q-score 30
Minimum read lenght 220 bp
Conserved reads 6820 reads
% Conserved reads 43.7%